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Data for changes in neuropeptide prohormone genes among Cetartio-dactyla livestock and wild species associated with evolution and domestication
Cite this dataset:
Southey, Bruce; Rodriguez-Zas, Sandra L. (2022): Data for changes in neuropeptide prohormone genes among Cetartio-dactyla livestock and wild species associated with evolution and domestication. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2071917_V1
Dataset Description

This dataset contain information for the paper "Changes in neuropeptide prohormone genes among Cetartio-dactyla livestock and wild species associated with evolution and domestication" Veterinary Sciences, MDPI. Protein sequences were predicted using GeneWise for 98 neuropeptide prohormone genes from publicly available genomes of 118 Cetartiodactyla species. All predictions (CetartiodactylaSequences2022.zip) were manually verified. Sequences were aligned within each prohormone using MAFFT (MDPImultalign2022.zip includes multiple sequence alignment of all species available for each prohormone). Phylogenetic gene trees were constructed using PhyML and the species tree was constructed using ASTRAL (MDPItree2022.zip). The data is released under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0).
Subject Life Sciences
Keywords prohormone; neuropeptide; Cetartiodactyla; Cetartiodactyla; phylogenetics; gene tree; species tree
License See license.txt file in dataset.
Funder U.S. National Institutes of Health (NIH)-Grant:P30 DA018310
Corresponding Creator Bruce Southey
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Version DOI Comment Publication Date
1 10.13012/B2IDB-2071917_V1 2022-06-01

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