Pastinaca sativa P450s - CYP71AJ4 variants in New Zealand and North America

Cure, Anne; Calla, Bernarda; Berenbaum, May; Schuler, Mary

doi:10.13012/B2IDB-2087040_V1

Citation:

Cure, Anne; Calla, Bernarda; Berenbaum, May; Schuler, Mary (2018): Pastinaca sativa P450s - CYP71AJ4 variants in New Zealand and North America. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2087040_V1

If you use this dataset, please cite it.

Persistent link for this item: https://doi.org/10.13012/B2IDB-2087040_V1


Dataset Description	Nucleotide sequences from wild parsnip CYP71AJ4 (angelic in synthase. Genbank EF191021) were obtained by Sanger sequencing. Seeds from individual plants from different populations were harvested to obtain corresponding cDNA. The cDNA was cloned and directly sequenced. Aminoacid translations were obtained using standard codon usage. Alignments of CYP71AJ4 sequences (involved in angular furanocoumarin biosynthesis) with as the reference sequence. Consistent amino acid variabilities were found between some populations. The relationship between sequencing variability and selective pressure is not yet known.
Subject	Life Sciences
Keywords	Pastinaca sativa; parsnip; furanocoumarins; psoralen
License	CC BY
Funder	U.S. National Science Foundation (NSF) - Grant: NSFDEB1457731
Corresponding Creator	Bernarda Calla
Downloaded	115 times

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Version	DOI	Comment	Publication Date
1	10.13012/B2IDB-2087040_V1		2018-09-26

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12_documents_from_CYP71AJ_201_301__Wisconsin__USA_.fasta 6.09 KB File
43_documents_from_CYP71AJ_COT_ROC__Karitane_and_Bushey__New_Zealand_.fasta 22 KB File
4_documents_from_CYP71AJ4_11__Ontario__Canada_.fasta 2.03 KB File
6_documents_from_CYP71AJ4_4002__Illinois__USA_.fasta 3.06 KB File
README.txt 3.73 KB File

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