MAGUS+eHMMs: Improved Multiple Sequence Alignment Accuracy for Fragmentary Sequences
Cite this dataset:
Shen, Chengze; Zaharias, Paul; Warnow, Tandy (2021): MAGUS+eHMMs: Improved Multiple Sequence Alignment Accuracy for Fragmentary Sequences. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2419626_V1
Use this persistent URL to link to this dataset:
Dataset Description

This dataset contains 1) the cleaned version of 11 CRW datasets, 2) RNASim10k dataset in high fragmentation and 3) three CRW datasets (16S.3, 16S.T, 16S.B.ALL) in high fragmentation.
Subject Life Sciences
Keywords MAGUS;UPP;Multiple Sequence Alignment;PASTA;eHMMs
License CC0
Funder U.S. National Science Foundation (NSF)-Grant:2006069
Funder U.S. National Science Foundation (NSF)-Grant:1458652
Corresponding Creator Chengze Shen
Downloaded 227 times
Version DOI Comment Publication Date
1 10.13012/B2IDB-2419626_V1 2021-06-28
Open in Globus File Manager what's this?
476 Bytes File
25.2 MB File
1.14 MB File
316 MB File

Contact the Research Data Service for help interpreting this log.

RelatedMaterial create: {"material_type"=>"Article", "availability"=>nil, "link"=>"https://doi.org/10.1089/cmb.2021.0585", "uri"=>"10.1089/cmb.2021.0585", "uri_type"=>"DOI", "citation"=>"Shen, Chengze, Minhyuk Park, and Tandy Warnow. 2022. “WITCH: Improved Multiple Sequence Alignment Through Weighted Consensus Hidden Markov Model Alignment.” Journal of Computational Biology : A Journal of Computational Molecular Cell Biology, May. doi:10.1089/cmb.2021.0585.", "dataset_id"=>1946, "selected_type"=>"Article", "datacite_list"=>"IsSupplementTo,IsCitedBy"} 2022-05-23T16:28:51Z
RelatedMaterial create: {"material_type"=>"Article", "availability"=>nil, "link"=>"https://doi.org/10.1093/bioinformatics/btab788", "uri"=>"10.1093/bioinformatics/btab788", "uri_type"=>"DOI", "citation"=>"Chengze Shen, Paul Zaharias, Tandy Warnow, MAGUS+eHMMs: Improved Multiple Sequence Alignment Accuracy for Fragmentary Sequences, Bioinformatics, 2021;, btab788, https://doi.org/10.1093/bioinformatics/btab788", "dataset_id"=>1946, "selected_type"=>"Article", "datacite_list"=>"IsSupplementTo"} 2021-11-23T16:49:27Z