FASTA file of the final sequence alignment used in the phylogenetic analyses of Phytoplasmas detected in leafhoppers
Citation:
Trivellone, Valeria; Wei, Wei; Filippin, Luisa; Dietrich, Christopher H (2021): FASTA file of the final sequence alignment used in the phylogenetic analyses of Phytoplasmas detected in leafhoppers. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2694515_V1
Persistent link for this dataset:
Related Article Valeria Trivellone, Wei Wei, Luisa Filippin, Christopher H. Dietrich. Screening potential insect vectors in a museum biorepository reveals undiscovered diversity of plant pathogens in natural areas. Authorea. February 19, 2021. DOI: 10.22541/au.161372577.77393543/v1
Dataset Description

The PhytoplasmasRef_Trivellone_etal.fas fasta file contains the original final sequence alignment used in the phylogenetic analyses of Trivellone et al. (Ecology and Evolution, in review). The 27 sequences (21 phytoplasma reference strains and 6 phytoplasmas strains from the present study) were aligned using the Muscle algorithm as implemented in MEGA 7.0 with default settings. The final dataset contains 952 positions of the F2n/R2 fragment of the 16S rRNA gene.
The data analyses are further described in the cited original paper.
Subject Life Sciences
Keywords Hemiptera; Cicadellidae; Mollicutes; Phytoplasma; biorepository
License CC0
Funder U.S. National Science Foundation (NSF) - Grant: DEB-1639601
Funder Swiss National Science Foundation - Grant: P2NEP3_168526
Corresponding Creator Valeria Trivellone
Downloaded 8 times
Version DOI Comment Publication Date
1 10.13012/B2IDB-2694515_V1 2021-03-10
PhytoplasmasRef_Trivellone_etal.fas 25.9 KB File

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