FASTA file of the final sequence alignment used in the phylogenetic analyses of Phytoplasmas detected in leafhoppers

Trivellone, Valeria; Wei, Wei; Filippin, Luisa; Dietrich, Christopher H

doi:10.13012/B2IDB-2694515_V1

Illinois Data Bank - Dataset

FASTA file of the final sequence alignment used in the phylogenetic analyses of Phytoplasmas detected in leafhoppers

Cite this dataset:

Trivellone, Valeria; Wei, Wei; Filippin, Luisa; Dietrich, Christopher H (2021): FASTA file of the final sequence alignment used in the phylogenetic analyses of Phytoplasmas detected in leafhoppers. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2694515_V1

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Dataset Description	The PhytoplasmasRef_Trivellone_etal.fas fasta file contains the original final sequence alignment used in the phylogenetic analyses of Trivellone et al. (Ecology and Evolution, in review). The 27 sequences (21 phytoplasma reference strains and 6 phytoplasmas strains from the present study) were aligned using the Muscle algorithm as implemented in MEGA 7.0 with default settings. The final dataset contains 952 positions of the F2n/R2 fragment of the 16S rRNA gene. The data analyses are further described in the cited original paper.
Subject	Life Sciences
Keywords	Hemiptera; Cicadellidae; Mollicutes; Phytoplasma; biorepository
License	CC0
Funder	U.S. National Science Foundation (NSF)-Grant:DEB-1639601
Funder	Swiss National Science Foundation-Grant:P2NEP3_168526
Corresponding Creator	Valeria Trivellone
Downloaded	218 times

Versions

Version	DOI	Comment	Publication Date
1	10.13012/B2IDB-2694515_V1		2021-03-10

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RelatedMaterial	update: {"uri"=>[nil, ""], "uri_type"=>[nil, ""], "datacite_list"=>[nil, ""]}	2021-03-11T20:42:21Z