Illinois Data Bank - Dataset

Simulation trajectories for "A DNA turbine powered by a transmembrane potential across a nanopore"
Cite this dataset:
Maffeo, Christopher; Aksimentiev, Aleksei (2023): Simulation trajectories for "A DNA turbine powered by a transmembrane potential across a nanopore". University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-3458097_V1
Dataset Description

Simulation trajectory data and scripts for Nature Nanotechnology manuscript "A DNA turbine powered by a transmembrane potential across a nanopore" that demonstrates a rationally designed nanoscale DNA-origami turbine with three chiral blades that uses a transmembrane electrochemical potential across a nanopore to drive a DNA bundle into sustained unidirectional rotations of up to 10 revolutions/s. Driven by the asymmetric mobility of a DNA duplex, the rotation direction of the turbine is set by its designed chirality and the salinity of the solvent.
Subject Physical Sciences
Keywords All-atom MD simulation; DNA; nanotechnology; motors and rotors
License CC BY
Funder U.S. National Science Foundation (NSF)-Grant:DMR-1827346
Corresponding Creator Aleksei Aksimentiev
Downloaded 152 times
Version DOI Comment Publication Date
1 10.13012/B2IDB-3458097_V1 2023-10-26

Open in Globus File Manager what's this?
1.83 KB File
3.86 GB File
8.95 GB File
315 MB File
3.04 GB File
20 KB File

Contact the Research Data Service for help interpreting this log.

RelatedMaterial create: {"material_type"=>"Code", "availability"=>nil, "link"=>"https://doi.org/10.5281/zenodo.8091178", "uri"=>"10.5281/zenodo.8091178", "uri_type"=>"DOI", "citation"=>"Xin Shi. (2023). Data for \"A DNA turbine powered by a transmembrane potential across a nanopore\" [Data set]. In A DNA turbine powered by a transmembrane potential across a nanopore. Zenodo. https://doi.org/10.5281/zenodo.8091178", "dataset_id"=>2565, "selected_type"=>"Code", "datacite_list"=>"IsSupplementTo", "note"=>nil, "feature"=>nil} 2023-10-31T16:41:26Z
RelatedMaterial update: {"link"=>["", "https://doi.org/10.1038/s41565-023-01527-8"], "uri"=>["", "10.1038/s41565-023-01527-8"], "uri_type"=>["", "DOI"], "citation"=>["Xin Shi, Anna-Katharina Pumm, Christopher Maffeo, Fabian Kohler, Elija Feigl, Wenxuan Zhao, Daniel Verschueren, Ramin Golestanian, Aleksei Aksimentiev, Hendrik Dietz, Cees Dekker. \"A DNA turbine powered by a transmembrane potential across a nanopores.\" Nature Nanotechnology", "Xin Shi, Anna-Katharina Pumm, Christopher Maffeo, Fabian Kohler, Elija Feigl, Wenxuan Zhao, Daniel Verschueren, Ramin Golestanian, Aleksei Aksimentiev, Hendrik Dietz, Cees Dekker. A DNA turbine powered by a transmembrane potential across a nanopores. Nat. Nanotechnol. (2023). https://doi.org/10.1038/s41565-023-01527-8"], "datacite_list"=>["", "IsSupplementTo"]} 2023-10-31T16:41:26Z