Version DOI Comment Publication Date
1 10.13012/B2IDB-3975180_V1 2021-10-11
1.11 GB File

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update: {"nested_updated_at"=>[nil, Fri, 15 Apr 2022 20:18:08.809397000 UTC +00:00]} 2024-01-03T18:24:00Z
update: {"description"=>["This dataset contains the ClonalKinetic dataset that was used in SimiC and its intermediate results for comparison. The Detail description can be found in the text file 'clonalKinetics_Example_data_description.txt' and 'ClonalKinetics_filtered.DF_data_description.txt'. The required input data for SimiC contains: \r\n1. ClonalKinetics_filtered.clustAssign.txt => cluster assignment for each cell. \r\n2. ClonalKinetics_filtered.DF.pickle => filtered scRNAseq matrix. \r\n3. ClonalKinetics_filtered.TFs.pickle => list of driver genes. \r\n\r\nThe results after running SimiC contains:\r\n1. ClonalKinetics_filtered_L10.01_L20.01_Ws.pickle => inferred GRNs for each cluster\r\n2. ClonalKinetics_filtered_L10.01_L20.01_AUCs.pickle => regulon activity scores for each cell and each driver gene.", "This dataset contains the ClonalKinetic dataset that was used in SimiC and its intermediate results for comparison. The Detail description can be found in the text file 'clonalKinetics_Example_data_description.txt' and 'ClonalKinetics_filtered.DF_data_description.txt'. The required input data for SimiC contains: \r\n1. ClonalKinetics_filtered.clustAssign.txt => cluster assignment for each cell. \r\n2. ClonalKinetics_filtered.DF.pickle => filtered scRNAseq matrix. \r\n3. ClonalKinetics_filtered.TFs.pickle => list of driver genes. \r\n\r\nThe results after running SimiC contains:\r\n1. ClonalKinetics_filtered_L10.01_L20.01_Ws.pickle => inferred GRNs for each cluster\r\n2. ClonalKinetics_filtered_L10.01_L20.01_AUCs.pickle => regulon activity scores for each cell and each driver gene.\r\n\r\n<b>NOTE:</b> “ClonalKinetics_filtered.rds” file which is mentioned in “ClonalKinetics_filtered.DF_data_description.txt” is an intermediate file and the authors have put all the processed in the pickle/txt file as described in the filtered data text."]} 2021-10-11T18:36:07Z
update: {"release_date"=>[nil, Mon, 11 Oct 2021], "publication_state"=>["file embargo", "released"]} 2021-10-11T15:21:10Z
update: {"release_date"=>[Wed, 05 Oct 2022, nil]} 2021-10-11T15:21:10Z