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update: {"nested_updated_at"=>[Thu, 18 Apr 2024 18:23:38.899480000 UTC +00:00, Fri, 26 Apr 2024 16:57:49.000991000 UTC +00:00]}
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2024-04-26T16:57:49Z
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update: {"nested_updated_at"=>[Wed, 13 Dec 2023 21:25:21.865186000 UTC +00:00, Thu, 18 Apr 2024 18:23:38.899480000 UTC +00:00]}
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2024-04-18T18:23:38Z
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update: {"nested_updated_at"=>[nil, Wed, 13 Dec 2023 21:25:21.865186000 UTC +00:00]}
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2024-01-03T18:24:15Z
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update: {"description"=>["This upload contains one additional set of datasets (RNASim10k, ten replicates) used in Experiment 2 of the EMMA paper (appeared in WABI 2023): Shen, Chengze, Baqiao Liu, Kelly P. Williams, and Tandy Warnow. \"EMMA: A New Method for Computing Multiple Sequence Alignments given a Constraint Subset Alignment\".\r\n\r\nThe zipped file has the following structure:\r\n10k\r\n|__R0\r\n |__unaln.fas\r\n |__true.fas\r\n |__true.tre\r\n|__R1\r\n...\r\n\r\n# Alignment files:\r\n1. `unaln.fas`: all unaligned sequences.\r\n2. `true.fas`: the reference alignment of all sequences.\r\n3. `true.tre`: the reference tree on all sequences.\r\n\r\nFor other datasets that uniquely appeared in EMMA, please refer to the related dataset: Shen, Chengze; Liu, Baqiao; Williams, Kelly P.; Warnow, Tandy (2022): Datasets for EMMA: A New Method for Computing Multiple Sequence Alignments given a Constraint Subset Alignment. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2567453_V1", "This upload contains one additional set of datasets (RNASim10k, ten replicates) used in Experiment 2 of the EMMA paper (appeared in WABI 2023): Shen, Chengze, Baqiao Liu, Kelly P. Williams, and Tandy Warnow. \"EMMA: A New Method for Computing Multiple Sequence Alignments given a Constraint Subset Alignment\".\r\n\r\nThe zipped file has the following structure:\r\n10k\r\n|__R0\r\n |__unaln.fas\r\n |__true.fas\r\n |__true.tre\r\n|__R1\r\n...\r\n\r\n# Alignment files:\r\n1. `unaln.fas`: all unaligned sequences.\r\n2. `true.fas`: the reference alignment of all sequences.\r\n3. `true.tre`: the reference tree on all sequences.\r\n\r\nFor other datasets that uniquely appeared in EMMA, please refer to the related dataset (which is linked below): Shen, Chengze; Liu, Baqiao; Williams, Kelly P.; Warnow, Tandy (2022): Datasets for EMMA: A New Method for Computing Multiple Sequence Alignments given a Constraint Subset Alignment. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2567453_V1"]}
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2023-09-14T16:20:54Z
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update: {"description"=>["This upload contains one additional set of datasets (RNASim10k, ten replicates) used in Experiment 2 of the EMMA paper (appeared in WABI 2023): Shen, Chengze, Baqiao Liu, Kelly P. Williams, and Tandy Warnow. \"EMMA: A New Method for Computing Multiple Sequence Alignments given a Constraint Subset Alignment\".\r\n\r\nThe zipped file has the following structure:\r\n10k\r\n|__R0\r\n |__unaln.fas\r\n |__true.fas\r\n |__true.tre\r\n|__R1\r\n...\r\n\r\n# Alignment files:\r\n1. `unaln.fas`: all unaligned sequences.\r\n2. `true.fas`: the reference alignment of all sequences.\r\n3. `true.tre`: the reference tree on all sequences.\r\n\r\nFor other datasets that uniquely appeared in EMMA, please refer to https://databank.illinois.edu/datasets/IDB-2567453", "This upload contains one additional set of datasets (RNASim10k, ten replicates) used in Experiment 2 of the EMMA paper (appeared in WABI 2023): Shen, Chengze, Baqiao Liu, Kelly P. Williams, and Tandy Warnow. \"EMMA: A New Method for Computing Multiple Sequence Alignments given a Constraint Subset Alignment\".\r\n\r\nThe zipped file has the following structure:\r\n10k\r\n|__R0\r\n |__unaln.fas\r\n |__true.fas\r\n |__true.tre\r\n|__R1\r\n...\r\n\r\n# Alignment files:\r\n1. `unaln.fas`: all unaligned sequences.\r\n2. `true.fas`: the reference alignment of all sequences.\r\n3. `true.tre`: the reference tree on all sequences.\r\n\r\nFor other datasets that uniquely appeared in EMMA, please refer to the related dataset: Shen, Chengze; Liu, Baqiao; Williams, Kelly P.; Warnow, Tandy (2022): Datasets for EMMA: A New Method for Computing Multiple Sequence Alignments given a Constraint Subset Alignment. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2567453_V1"], "version_comment"=>[nil, ""], "subject"=>[nil, "Technology and Engineering"]}
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2023-09-14T16:20:03Z
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