Honey bee MERFISH data for SpaceExpress paper

Name: Honey bee MERFISH data for SpaceExpress paper
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: smFISH, single transcript spatial transcriptomics, Honey bee brain, Apis mellifera, MERFISH

Han, Hee-Sun; Schrader, Alex; Lee, JuYeon; Yeo, Seokjin; Traniello, Ian

doi:10.13012/B2IDB-5536668_V1

Illinois Data Bank - Dataset

Honey bee MERFISH data for SpaceExpress paper

Cite this dataset:

Han, Hee-Sun; Schrader, Alex; Lee, JuYeon; Yeo, Seokjin; Traniello, Ian (2024): Honey bee MERFISH data for SpaceExpress paper. University of Illinois Urbana-Champaign. https://doi.org/10.13012/B2IDB-5536668_V1

Use this persistent URL to link to this dataset:


Dataset Description	Honey bee (apis mellifera) MERFISH data set prepared by the Han lab, from brains collected by the Robinson lab at UIUC. Dataset is comprised of ~22 thousand cells and 130 genes with x,y locations for each cell. Jupyter notebook file is included as an example to load the data using Scanpy.
Subject	Life Sciences
Keywords	smFISH; single transcript spatial transcriptomics; Honey bee brain; Apis mellifera; MERFISH
License	CC0
Funder	U.S. National Institutes of Health (NIH)-Grant:1 R35 GM147420
Corresponding Creator	Hee-Sun Han
Downloaded	10 times

Versions

Version	DOI	Comment	Publication Date
1	10.13012/B2IDB-5536668_V1		2024-11-27

Files


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Honeybee_SpaceExpress.zip 2.2 MB File
honeybee_spaceexpress_notes.txt 664 Bytes File

Change Log

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Dataset	update: {"version_comment"=>[nil, ""], "subject"=>[nil, "Life Sciences"]}	2024-11-27T15:51:08Z
Dataset	update: {"publication_state"=>["file embargo", "released"]}	2024-11-27T14:00:08Z