Notothenia coriiceps and Paranotothenia angustata genome assemblies

York, Julia M.; Bhat, Shriram; Kim, Jinmu; Cardenas, Leyla; Cheng, Chi-Hing Christina

doi:10.13012/B2IDB-7296574_V1

Illinois Data Bank - Dataset

Notothenia coriiceps and Paranotothenia angustata genome assemblies

Cite this dataset:

York, Julia M.; Bhat, Shriram; Kim, Jinmu; Cardenas, Leyla; Cheng, Chi-Hing Christina (2025): Notothenia coriiceps and Paranotothenia angustata genome assemblies. University of Illinois Urbana-Champaign. https://doi.org/10.13012/B2IDB-7296574_V1

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Dataset Description	This repository contains supplementary information, alternate genome assemblies, annotation, and predicted protein datasets for Notothenia coriiceps and Paranotothenia angustata genome assemblies. Primary assemblies, mitochondrial assemblies, RNA-Seq data, and raw read data can be found under NCBI Bioproject PRJNA1310647.
Keywords	notothenioid; Antarctic; fish; genome; DNA
License	CC BY
Funder	University of Illinois Foundation Cheng-DeVries Research Fund-Grant:339045
Funder	US Department of State Fulbright US Scholar
Corresponding Creator	Chi-Hing Christina Cheng

Versions

Version	DOI	Comment	Publication Date
1	10.13012/B2IDB-7296574_V1		2025-10-15

Change Log

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Dataset	update: {"publication_state"=>["metadata embargo", "released"]}	2025-10-15T13:00:08Z
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Dataset	update: {"release_date"=>[Sat, 01 Nov 2025, Wed, 15 Oct 2025], "version_comment"=>[nil, ""], "subject"=>[nil, ""], "external_files_link"=>[nil, ""], "external_files_note"=>[nil, ""]}	2025-10-13T17:24:03Z


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README.txt 2.62 KB File
All_Supplemental_Tables.xlsx 37 KB View File
NcorPang_genome_supplemental_material.pdf 1.1 MB View File
Supplemental figure 1.pdf 9.87 MB View File
Supplemental figure 2.pdf 276 KB View File
Supplemental figure 3.png 792 KB File
Supplemental figure 4.pdf 17.7 KB View File
Supplemental figure 5.pdf 17.5 KB View File
Supplemental figure 6.pdf 2.55 MB View File
Supplemental figure 7.pdf 136 KB View File
Supplemental figure 8.pdf 152 KB View File
Supplemental table 1.csv 17.7 KB File
Supplemental table 2.csv 3.07 KB File
Supplemental table 3.csv 458 Bytes File
Supplemental table 4.csv 1.06 KB File
Supplemental table 5.csv 1.48 KB File
Supplemental table 6.csv 14.1 KB File
Supplemental table 7.csv 696 Bytes File
ncor1_atg000001l.mitogenome.fa 19.2 KB File
ncor1_genereport.txt 9.04 KB File
ncor1_genome.aa 20.8 MB File
ncor1_genome.codingseq 59.6 MB File
ncor1_genome.fa 1.07 GB File
ncor1_genome.gff3 91.6 MB File
ncor1_genome_unpurged.fa 1.09 GB File
ncor1_ptg000001c.mitogenome.fa 20.9 KB File
pang4_genereport.txt 9.04 KB File
pang4_genome.aa 19.8 MB File
pang4_genome.codingseq 56.9 MB File
pang4_genome.fa 971 MB File
pang4_genome.gff3 87 MB File
pang4_ptg000001c.mitogenome.fa 18.3 KB File
pang4_ptg000002l.mitogenome.fa 16.5 KB File