University Library, University of Illinois at Urbana-Champaign
Data files for phylogenetic analysis of Typhlocybinae (Hemiptera: Cicadellidae)
Yan, Bin; Dietrich, Christopher; Yu, Xiaofei; Dai, Renhuai; Maofa, Yang (2022): Data files for phylogenetic analysis of Typhlocybinae (Hemiptera: Cicadellidae). University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-8761342_V1
Bin, Y., C.H. Dietrich, X. Yu, J. Meng, R. Dai and M. Yang (in press). Mitogenomic phylogeny of Typhlocybinae (Hemiptera: Cicadellidae) reveals homoplasy in tribal diagnostic morphological traits. Ecology & Evolution (2022, in press).
The files are plain text and contain the original data used in phylogenetic analyses of of Typhlocybinae (Bin, Dietrich, Yu, Meng, Dai and Yang 2022: Ecology & Evolution, in press). The three files with extension .phy are text files with aligned DNA sequences in the standard PHYLIP format and correspond to Matrix 1 (amino acid alignment), Matrix 2 (nucleotide alignment of first two codon positions of protein-coding genes) and Matrix 3 (nucleotide alignment of protein-coding genes plus 2 ribosomal genes) described in the Methods section. An additional text file in NEXUS format (.nex extension) contains the morphological character data used in the ancestral state reconstruction (ASCR) analysis described in the Methods. NEXUS is a standard format used by various phylogenetic analysis software. For more information on data file content, see the included "readme" files.