Illinois Data Bank

Data for: A molecular phylogenetic analysis of the genera of fruit doves and their allies using dense taxonomic sampling

Multiple sequence alignments from concatenated nuclear and mitochondrial genes and resulting phylogenetic tree files of fruit doves and their close relatives. Files include: BEAST input XML file (fruit_dove_beast_input.xml); a maximum clade credibility tree from a BEAST analysis (fruit_dove_beast_mcc.tre); concatenated multiple sequence alignment NEXUS files for the novel dataset (fruit_dove_concatenated_alignment.nex, 76 taxa, 4,277 characters) and the dataset with additional sequences (fruit_dove_plus_cibois_data_concatenated_alignment.nex, 204 taxa, 4,277 characters), both of which contain a MrBayes block including partition information; and 50% majority-rule consensus trees generated from MrBayes analyses, using the NEXUS alignment files as inputs (fruit_dove_mrbayes_consensus.tre, fruit_dove_plus_cibois_data_mrbayes_consensus.tre).

Life Sciences
fruit doves; multiple sequence alignment; phylogeny; Aves: Columbidae
CC0
U.S. National Science Foundation (NSF)-Grant:DEB-0118794
U.S. National Science Foundation (NSF)-Grant:DEB-0612938
U.S. National Science Foundation (NSF)-Grant:DEB-1050706
U.S. National Science Foundation (NSF)-Grant:DEB-1239788
U.S. National Science Foundation (NSF)-Grant:DEB-1342604
Andrew D. Sweet
992 times
Version DOI Comment Publication Date
1 10.13012/B2IDB-9797270_V1 2019-08-13

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RelatedMaterial update: {"datacite_list"=>["", "IsSupplementTo"]} 2019-08-30T18:19:36Z
Dataset update: {"subject"=>["", "Life Sciences"]} 2019-08-30T18:19:36Z
RelatedMaterial update: {"link"=>["", "https://iopn.library.illinois.edu/journals/inhs/article/view/93"], "uri"=>[nil, ""], "uri_type"=>[nil, ""], "datacite_list"=>[nil, ""]} 2019-08-21T14:40:07Z
Dataset update: {"version_comment"=>[nil, ""], "subject"=>[nil, ""]} 2019-08-21T14:40:07Z
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