Data for: A molecular phylogenetic analysis of the genera of fruit doves and their allies using dense taxonomic sampling
Dataset Description |
Multiple sequence alignments from concatenated nuclear and mitochondrial genes and resulting phylogenetic tree files of fruit doves and their close relatives. Files include: BEAST input XML file (fruit_dove_beast_input.xml); a maximum clade credibility tree from a BEAST analysis (fruit_dove_beast_mcc.tre); concatenated multiple sequence alignment NEXUS files for the novel dataset (fruit_dove_concatenated_alignment.nex, 76 taxa, 4,277 characters) and the dataset with additional sequences (fruit_dove_plus_cibois_data_concatenated_alignment.nex, 204 taxa, 4,277 characters), both of which contain a MrBayes block including partition information; and 50% majority-rule consensus trees generated from MrBayes analyses, using the NEXUS alignment files as inputs (fruit_dove_mrbayes_consensus.tre, fruit_dove_plus_cibois_data_mrbayes_consensus.tre). |
Subject |
Life Sciences |
Keywords |
fruit doves; multiple sequence alignment; phylogeny; Aves: Columbidae |
License |
CC0 |
Funder |
U.S. National Science Foundation (NSF)-Grant:DEB-0118794 |
Funder |
U.S. National Science Foundation (NSF)-Grant:DEB-0612938 |
Funder |
U.S. National Science Foundation (NSF)-Grant:DEB-1050706 |
Funder |
U.S. National Science Foundation (NSF)-Grant:DEB-1239788 |
Funder |
U.S. National Science Foundation (NSF)-Grant:DEB-1342604 |
Corresponding Creator |
Andrew D. Sweet |
Downloaded |
992 times |
| Version | DOI | Comment | Publication Date |
|---|---|---|---|
| 1 | 10.13012/B2IDB-9797270_V1 | 2019-08-13 |
Contact the Research Data Service for help interpreting this log.
| RelatedMaterial | update: {"link"=>["https://iopn.library.illinois.edu/journals/inhs/article/view/93", "https://doi.org/10.21900/j.inhs.v42.93"], "uri"=>["", "10.21900/j.inhs.v42.93"], "uri_type"=>["", "DOI"], "note"=>[nil, ""], "feature"=>[nil, false]} | 2024-01-26T20:43:54Z |
| RelatedMaterial | update: {"datacite_list"=>["", "IsSupplementTo"]} | 2019-08-30T18:19:36Z |
| Dataset | update: {"subject"=>["", "Life Sciences"]} | 2019-08-30T18:19:36Z |
| RelatedMaterial | update: {"link"=>["", "https://iopn.library.illinois.edu/journals/inhs/article/view/93"], "uri"=>[nil, ""], "uri_type"=>[nil, ""], "datacite_list"=>[nil, ""]} | 2019-08-21T14:40:07Z |
| Dataset | update: {"version_comment"=>[nil, ""], "subject"=>[nil, ""]} | 2019-08-21T14:40:07Z |