Illinois Data Bank - Dataset

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Data from: Polynomial-Time Statistical Estimation of Species Trees under Gene Duplication and Loss
Cite this dataset:
Legried, Brandon; Molloy, Erin K.; Warnow, Tandy; Roch, Sebastien (2019): Data from: Polynomial-Time Statistical Estimation of Species Trees under Gene Duplication and Loss. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2626814_V1
Dataset Description

This repository includes scripts and datasets for the paper, "Polynomial-Time Statistical Estimation of Species Trees under Gene Duplication and Loss."

Subject Life Sciences
Keywords Species tree estimation; gene duplication and loss; identifiability; statistical consistency; ASTRAL
License CC0
Funder Ira and Debra Cohen Graduate Fellowship in Computer Science
Funder U.S. National Science Foundation (NSF)-Grant:0725070
Funder U.S. National Science Foundation (NSF)-Grant:1238993
Corresponding Creator Erin K. Molloy
Downloaded 1012 times
Version DOI Comment Publication Date
3 10.13012/B2IDB-2626814_V3 This version includes additional analysis and discussion regarding one of the parameters used in the simulation study (see revised-appendix-b.pdf for details). 2020-07-15
2 10.13012/B2IDB-2626814_V2 This version includes fixed version of ASTRID (for multi-allele datasets) and fixed results (.csv) which was made in January, 2020 as part of bug fixing. 2020-01-22
1 10.13012/B2IDB-2626814_V1 2019-11-11

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Funder create: {"name"=>"U.S. National Science Foundation (NSF)", "identifier"=>"10.13039/100000001", "identifier_scheme"=>"DOI", "grant"=>"1238993", "dataset_id"=>1120, "code"=>"NSF"} 2019-11-11T18:14:06Z
Funder create: {"name"=>"U.S. National Science Foundation (NSF)", "identifier"=>"10.13039/100000001", "identifier_scheme"=>"DOI", "grant"=>"0725070", "dataset_id"=>1120, "code"=>"NSF"} 2019-11-11T18:14:06Z
Funder create: {"name"=>" Ira and Debra Cohen Graduate Fellowship in Computer Science", "identifier"=>"", "identifier_scheme"=>"", "grant"=>"", "dataset_id"=>1120, "code"=>"other"} 2019-11-11T18:14:06Z
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Dataset update: {"keywords"=>["", "Species tree estimation; gene duplication and loss; identifiability; statistical consistency; ASTRAL"]} 2019-11-11T18:07:53Z