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Illinois Data Bank Dataset Search Results
Dataset Search Results
published: 2020-08-19
Jetti, Yaswanth Sai; Dunn, Alison C. (2020): The matrix of influence coefficients due to pyramidal distribution on an overlapping hexagonal grid. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-0925335_V1
This data set is a matrix of values. The element in the row "i" and the column "j" denotes the influence of hexagonal pyramidal distribution at node "i" on the node "j". The size of the matrix is 16641x16641. This matrix corresponds to a 129x129 grid. Influence coefficient matrix on a smaller grid can be obtained by appropriately choosing the elements from the bigger matrix.
keywords:
Influence coefficients
published: 2011-09-20
Swenson, M. Shel; Suri, Rahul; Linder, C. Randal; Warnow, Tandy; Nguyen, Nam-puhong; Mirarab, Siavash; Neves, Diogo Telmo; Sobral, João Luís; Pingali, Keshav; Nelesen, Serita; Liu, Kevin; Wang, Li-San (2011): Data for SuperFine, DACTAL, and BeeTLe. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-2952208_V1
This page provides the data for SuperFine, DACTAL, and BeeTLe publications. - Swenson, M. Shel, et al. "SuperFine: fast and accurate supertree estimation." Systematic biology 61.2 (2012): 214. - Nguyen, Nam, Siavash Mirarab, and Tandy Warnow. "MRL and SuperFine+ MRL: new supertree methods." Algorithms for Molecular Biology 7 (2012): 1-13. - Neves, Diogo Telmo, et al. "Parallelizing superfine." Proceedings of the 27th Annual ACM Symposium on Applied Computing. 2012. - Nelesen, Serita, et al. "DACTAL: divide-and-conquer trees (almost) without alignments." Bioinformatics 28.12 (2012): i274-i282. - Liu, Kevin, and Tandy Warnow. "Treelength optimization for phylogeny estimation." PLoS One 7.3 (2012): e33104.
published: 2012-07-01
Mirarab, Siavash; Ngyuen, Nam-Phuong; Warnow, Tandy (2012): Data for SEPP: SATé-Enabled Phylogenetic Placement.. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-9316702_V1
This dataset provides the data for Mirarab, Siavash, Nam Nguyen, and Tandy Warnow. "SEPP: SATé-enabled phylogenetic placement." Biocomputing 2012. 2012. 247-258.
published: 2023-02-07
Willson, James; Tabatabaee, Yasamin; Liu, Baqiao; Warnow, Tandy (2023): Data from: DISCO+QR: Rooting Species Trees in the Presence of GDL and ILS. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-5748609_V1
Data sets from "DISCO+QR: Rooting Species Trees in the Presence of GDL and ILS." It contains trees and sequences simulated with gene duplication and loss under a variety of different conditions. Note: - trees.tar.gz contains the simulated gene-family trees used in our experiments (both true trees from SimPhy as well as trees estimated from alignments). - alignments.tar.gz contains simulated sequence data used for estimating the gene-family trees
keywords:
evolution; computational biology; bioinformatics; phylogenetics
published: 2023-04-06
Warnow, Tandy; Park, Minhyuk (2023): INDELible simulated datesets with sequence length heterogeneity. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-0900513_V1
This is a simulated sequence dataset generated using INDELible and processed via a sequence fragmentation procedure.
keywords:
sequence length heterogeneity;indelible;computational biology;multiple sequence alignment
published: 2018-12-13
Yin, Dandong; Wang, Shaowen (2018): CyberGIS-Jupyter HAND Example Notebook. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-6316661_V2
The dataset contains a complete example (inputs, outputs, codes, intermediate results, visualization webpage) of executing Height Above Nearest Drainage HAND workflow with CyberGIS-Jupyter.
keywords:
cybergis; hydrology; Jupyter
published: 2021-10-15
Swenson, Gary (2021): SABER Intra-annual Data. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-6186460_V1
Atomic oxygen densities in the MLT, averaged for 2002-2018 for 26, 14 day periods, beginning January 1.
keywords:
SABER data
published: 2021-10-15
Swenson, Gary (2021): SCIAMACHY IAV Oxygen data, 2002-2012. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-9526770_V1
Atomic oxygen data from SCIAMACHY, for the MLT, 2002-2012, averaged for 26, 14 day periods, beginning January 1.
keywords:
SCIAMACHY data
published: 2017-12-14
Hepler, Katherine C. (2017): Python code for cost estimation of harvesting uranium from seawater and geospatial comparison of adsorbent performance. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-5835198_V1
keywords:
uranium harvesting from seawater; Geospatial analysis; adsorbent performance; NPRE 412
published: 2018-04-06
Collins, Kodi; Warnow, Tandy (2018): PASTA For Proteins Data (BALiBASE). University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-4074787_V1
keywords:
protein; multiple sequence alignment; balibase
published: 2018-06-06
Balasubramanian, Srinidhi; Nelson, Andrew; Koloutsou-Vakakis, Sotiria; Lin, Jie; Rood, Mark; Myles, LaToya; Bernacchi, Carl (2018): Dataset for Evaluation of DeNitrification DeComposition Model for Estimating Ammonia Fluxes from Chemical Fertilizer Application. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-3773381_V1
DNDC scripts and outputs that were generated as a part of the research publication 'Evaluation of DeNitrification DeComposition Model for Estimating Ammonia Fluxes from Chemical Fertilizer Application'.
keywords:
DNDC; REA; ammonia emissions; fertilizers; uncertainty analysis
published: 2018-11-20
Corey, Ryan M.; Tsuda, Naoki; Singer, Andrew C. (2018): Wearable Microphone Impulse Responses. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-1932389_V1
A dataset of acoustic impulse responses for microphones worn on the body. Microphones were placed at 80 positions on the body of a human subject and a plastic mannequin. The impulse responses can be used to study the acoustic effects of the body and can be convolved with sound sources to simulate wearable audio devices and microphone arrays. The dataset also includes measurements with different articles of clothing covering some of the microphones and with microphones placed on different hats and accessories. The measurements were performed from 24 angles of arrival in an acoustically treated laboratory. Related Paper: Ryan M. Corey, Naoki Tsuda, and Andrew C. Singer. "Acoustic Impulse Responses for Wearable Audio Devices," IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), Brighton, UK, May 2019. All impulse responses are sampled at 48 kHz and truncated to 500 ms. The impulse response data is provided in WAVE audio and MATLAB data file formats. The microphone locations are provided in tab-separated-value files for each experiment and are also depicted graphically in the documentation. The file wearable_mic_dataset_full.zip contains both WAVE- and MATLAB-format impulse responses. The file wearable_mic_dataset_matlab.zip contains only MATLAB-format impulse responses. The file wearable_mic_dataset_wave.zip contains only WAVE-format impulse responses.
keywords:
Acoustic impulse responses; microphone arrays; wearables; hearing aids; audio source separation
published: 2018-11-18
Kwang, Jeffrey; Parker, Gary (2018): Dataset: Ultra-sensitivity of Numerical Landscape Evolution Models to their Initial Conditions. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-4484338_V1
This dataset contains experimental measurements used in the paper, "Ultra-sensitivity of Numerical Landscape Evolution Models to their Initial Conditions." (to be submitted). The data is taken from experimental runs in a miniature landscape model named the eXperimental Landscape Evolution (XLE) facility. In this facility, we complete five >24hr runs at 5 minute temporal resolution. Every five minutes, an planform image was capture, and a digital elevation model (DEM) was generated. For each run, images and a corresponding animation of images are documented. In addition,ASCII formatted DEMs along with color hillshade maps were generated. The hillshade map images were also made into an animation. This dataset is associated with the following publication: https://doi.org/10.1029/2019GL083305
keywords:
landscape evolution model; digital elevation model; geomorphology
published: 2017-12-01
Kwang, Jeffrey (2017): Dataset: Landscape evolution models using the stream power incision model show unrealistic behavior when m/n equals 0.5. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-7434833_V2
This dataset contains all the numerical results (digital elevation models) that are presented in the paper "Landscape evolution models using the stream power incision model show unrealistic behavior when m/n equals 0.5." The paper can be found at: http://www.earth-surf-dynam-discuss.net/esurf-2017-15/ The paper has been accepted, but the most up to date version may not be available at the link above. If so, please contact Jeffrey Kwang at jeffskwang@gmail.com to obtain the most up to date manuscript.
keywords:
landscape evolution models; digital elelvation model
published: 2017-12-20
Chen, Yanju; Bond, Tami (2017): Data from: Investigating the linear dependence of direct and indirect radiative forcing on emission of carbonaceous aerosols in a global climate model. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-7239548_V1
The dataset contains processed model fields used to generate data, figures and tables in the Journal of Geophysical Research article "Investigating the linear dependence of direct and indirect radiative forcing on emission of carbonaceous aerosols in a global climate model." The processed data are monthly averaged cloud properties (CCN, CDNC and LWP) and forcing variables (DRF and IRF) at original CAM5 spatial resolution (1.9° by 2.5°). Raw model output fields from CAM5 simulations are available through NERSC upon request. Please find more detailed information in the ReadMe file.
keywords:
carbonaceous aerosols; radiative forcing; emission; linearity
published: 2016-06-23
Donovan, Brian; Mori, Alec; Agrawal, Nimit; Meng, Yalan; Lee, Jong; Work, Daniel (2016): New York City Hourly Traffic Estimates (2010-2013). University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-4900670_V1
This dataset contains hourly traffic estimates (speeds) for individual links of the New York City road network for the years 2010-2013, estimated from New York City Taxis.
keywords:
traffic estimates; traffic conditions; New York City
published: 2017-10-10
Kozak, Derek L.; Luo, Jie; Olson, Scott M.; LaFave, James M.; Fahnestock, Larry A. (2017): Data from Modification of ground motions for use in Central North America: Southern Illinois surface ground motions for structural analysis. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-9696589_V1
This dataset contains ground motion data for Newmark Structural Engineering Laboratory (NSEL) Report Series 048, "Modification of ground motions for use in Central North America: Southern Illinois surface ground motions for structural analysis". The data are 20 individual ground motion time history records developed at each of the 10 sites (for a total of 200 ground motions). These accompanying ground motions are developed following the detailed procedure presented in Kozak et al. [2017].
keywords:
earthquake engineering; ground motion records; southern Illinois seismic hazard; dynamic structural analysis; conditional mean spectrum
published: 2017-07-29
Bond, Tami (2017): Data from: Plume-exit modeling to determine cloud condensation nuclei activity of aerosols from residential biofuel combustion. University of Illinois at Urbana-Champaign. https://doi.org/10.13012/B2IDB-6485436_V1
This dataset contains the PartMC-MOSAIC simulations used in the article “Plume-exit modeling to determine cloud condensation nuclei activity of aerosols from residential biofuel combustion”. The data is organized as a set of folders, each folder representing a different scenario modeled. Each folder contains a series of NetCDF files, which are the output of the PartMC-MOSAIC simulation. They contain information on particle and gas properties, both of the biofuel burning plume and background. Input files for PartMC-MOSAIC are also included. This dataset was used during the open review process at Atmospheric Chemistry and Physics (ACP) and supports both the discussion paper and final article.
keywords:
CCN; cloud condensation nuclei; activation; supersaturation; biofuel